Eric Johnson, MS, completed the University of Washington’s biostatistics master’s program in 2008. His thesis explored common theoretical problems involved with missing data. He quantified them, highlighting conditions leading to suboptimal performance, and provided new guidelines for using various multiple imputation techniques.
During his time at KPWHRI, Mr. Johnson has been involved with multiple projects involving direct intervention with the care-delivery system, observational studies and microsimulation modeling on colorectal and ovarian cancer, massage therapy, and estimating radiation exposure from medical imaging. His current responsibilities lie in research on obesity, opioids, and mental health.
Before earning his master’s degree, Mr. Johnson worked for four years as a research assistant on the Multi-Ethnic Study of Atherosclerosis (MESA), performing statistical analyses, verifying incoming data, and developing a process for providing data sets to all MESA researchers. Later, he was a research statistician with the Department of Veteran Affairs (VA), serving as the primary analyst in an investigation of how well VA hospitals performed non-cardiac surgeries. Mr. Johnson assessed statistical models used by the National Surgical Quality Improvement Program—then devised, tested, and implemented improved models, reporting his findings to VA leadership.
Multiple imputation; prediction models, working with large data
Implementing prediction models, and validating that they work as intended. Research into interventions that are financially feasible for health systems to widely implement
Cruz M, Shortreed SM, Richards JE, Coley RY, Yarborough BJ, Walker RL, Johnson E, Ahmedani BK, Rossom R, Coleman KJ, Boggs JM, Beck AL, Simon GE. Machine learning prediction of suicide risk does not identify patients without traditional risk factors. J Clin Psychiatry. 2022 Aug 31;83(5):21m14178. doi: 10.4088/JCP.21m14178. PubMed
Penfold RB, Carrell DS, Cronkite DJ, Pabiniak C, Dodd T, Glass AM, Johnson E, Thompson E, Arrighi HM, Stang PE. Development of a machine learning model to predict mild cognitive impairment using natural language processing in the absence of screening. BMC Med Inform Decis Mak. 2022 May 12;22(1):129. doi: 10.1186/s12911-022-01864-z. PubMed
Walker RL, Shortreed SM, Ziebell RA, Johnson E, Boggs JM, Lynch FL, Daida YG, Ahmedani BK, Rossom R, Coleman KJ, Simon GE. Evaluation of electronic health record-based suicide risk prediction models on contemporary data. Appl Clin Inform. 2021;12(4):778-787. doi: 10.1055/s-0041-1733908. Epub 2021 Aug 18. PubMed
Courcoulas AP, Johnson E, Arterburn DE, Haneuse S, Herrinton LJ, Fisher DP, Li RA, Theis MK, Liu L, Taylor B, Cooper J, Chin PL, Grinberg GG, Gupta A, Saurabh S, Um SS, Yenumula PR, Zelada JL, Coleman KJ. Reduction in long-term mortality after sleeve gastrectomy and gastric bypass compared to non-surgical patients with severe obesity. Ann Surg. 2023 Mar 1;277(3):442-448. doi: 10.1097/SLA.0000000000005155. Epub 2021 Aug 13. PubMed
Penfold RB, Whiteside U, Johnson EE, Stewart CC, Oliver MM, Shortreed SM, Beck A, Coleman KJ, Rossom RC, Lawrence JM, Simon GE. Utility of item 9 of the patient health questionnaire in the prospective identification of adolescents at risk of suicide attempt. Suicide Life Threat Behav. 2021 Jul 31. doi: 10.1111/sltb.12751. [Epub ahead of print]. PubMed
Penfold RB, Johnson E, Shortreed SM, Ziebell RA, Lynch FL, Clarke GN, Coleman KJ, Waitzfelder BE, Beck AL, Rossom RC, Ahmedani BK, Simon GE. Predicting suicide attempts and suicide deaths among adolescents following outpatient visits. J Affect Disord. 2021 Jul 1;294:39-47. doi: 10.1016/j.jad.2021.06.057. [Epub ahead of print]. PubMed
Coley RY, Johnson E, Simon GE, Cruz M, Shortreed SM. Racial/ethnic disparities in the performance of prediction models for death by suicide after mental health visits. JAMA Psychiatry. 2021 Apr 28:e210493. doi: 10.1001/jamapsychiatry.2021.0493. [Epub ahead of print]. PubMed
Coleman KJ, Shu YH, Fischer H, Johnson E, Yoon TK, Taylor B, Imam T, DeRose S, Haneuse S, Herrinton LJ, Fisher D, Li RA, Theis MK, Liu L, Courcoulas AP, Smith DH, Arterburn DE, Friedman AN. Bariatric surgery and risk of death in persons with chronic kidney disease. Ann Surg. 2021 Mar 3. doi: 10.1097/SLA.000000000000485. [Epub ahead of print]. PubMed
Tsui JI, Akosile MA, Lapham GT, Boudreau DM, Johnson EA, Bobb JF, Binswanger IA, Yarborough BJH, Glass JE, Rossom RC, Murphy MT, Cunningham CO, Arnsten JH, Thakral M, Saxon AJ, Merrill JO, Samet JH, Bart GB, Campbell CI, Loree AM, Silva A, Stotts AL, Ahmedani B, Braciszewski JM, Hechter RC, Northrup TF, Horigian VE, Bradley KA. Prevalence and medication treatment of opioid use disorder among primary care patients with hepatitis C and HIV. J Gen Intern Med. 2021 Feb 10. doi: 10.1007/s11606-020-06389-7. [Epub ahead of print]. PubMed
Koffman L, Levis AW, Arterburn D, Coleman KJ, Herrinton LJ, Cooper J, Ewing J, Fischer H, Fraser JR, Johnson E, Taylor B, Theis MK, Liu L, Courcoulas A, Li R, Fisher DP, Amsden L, Haneuse S. Investigating bias from missing data in an electronic health records-based study of weight loss after bariatric surgery. Obes Surg. 2021 Jan 19. doi: 10.1007/s11695-021-05226-y. [Epub ahead of print]. PubMed
Models that are easier to explain, use could have better uptake in health care settings.
Using doctor's notes to learn about drug reactions, dementia, and cannabis use.
David Arterburn and colleagues find that bariatric surgery is linked to lower death risk in persons with obesity and CKD.
Diverse Kaiser Permanente patients maintained weight better after gastric bypass than after sleeve gastrectomy
Dr. Rob Penfold leads pragmatic trial of new online version of proven program developed by UW colleagues.